Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKITALLFALCATVTHAELQTLDNDALQAINGQAGADLSLMLNLNQTSNGIFDNGSGGVCENVEFCHIGLAINKRFVQADTTKPSGWAENSDSGNKLWLV--FKGVQGTLNIQKMGLDGADLKYLDKSNTEIIKLAIQLSFSAAQPILIRNFGFNALSIEQDNFTSSTTTQGSSANMYDYAYFKKPTYAATANSANQQVATATPSAYDYGRETGFMGLMMNGNMAIQGKVMVFSCDGSHPRC
2KSM Chain:A ((73-203))-------------------------------------------------------------------------------GASALSLSLLSISRSGNTVTLIGDFPDEAAKAALMTALNGLLAPGVNVIDQIHVDPVVRSLDFSSAEPVFTASVPIPDFGLKVERDTVTLTGTAPSSEHKDAVKRAATSTWPDMKIVNNIEVTGQAPPGPP---------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2KSM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 492 16707 33.96 129.51
target 2D structure prediction score : 0.44
Monomeric hydrophicity matching model chain A : 0.59

3D Compatibility (PKB) : 33.96
2D Compatibility (Sec. Struct. Predict.) : 0.44
1D Compatibility (Hydrophobicity) : 0.59
QMean score : 0.109

(partial model without unconserved sides chains):
PDB file : Tito_2KSM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2KSM-query.scw
PDB file : Tito_Scwrl_2KSM.pdb: