Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKTRRKPMKFMTLNTHSWLEPE-----PEKKLQELADKILLEDYEVIALQEINQLLE-SEEVEPAKLMKFCPVKNQVPIRKDNFAYRLVQLLKEHGKEYFWSWEMSH---------IGYDKYEEGNALLTKKTLES-QVLTVSQFQKKEDYQTRKILIGKTKIDDQDIFVSSCHFSWWTD------KKSGFYFEWKNLENYFLE----TRVPLFFLGDFNNPVDSQGYYTVRESCLLLQDSYVVANEKGKAATVEKKID-----GWEQNTEKLRIDFIFVPEGMQVK-------------KYQRI--FDGIDSPIISDHYGVEIELDVNE
1ZWX Chain:A ((7-299))---YPGNFKITSHNVYLFSRNIYPNWGQMHRADLIAQADYMKNNDVVILNEAFDTSASHRLLN---------------------------NLRE-MYPHQTPVIGRSKHGWDKTEG---ALEDGGVAVVSQWPIVEKSQHIFQRGGGADRLSNKGFAYVKIMKNGKPYHIIGTHTQADDSLISKDTSRAIRAEQMQEIQTFIAKKNIPKDEIIFIGGDLNVNYGTDEYHDMLK---LLNVSSPA-NFNGQMATWDPTTNSMLKESYP-KAAPEYLDYIFVENGHARPHSWHNKVLHTKSPQWSVKSWFKTYTYQDFSDHYPVVGFTD---


General information:
TITO was launched using:
RESULT:

Template: 1ZWX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1313 58697 44.70 242.55
target 2D structure prediction score : 0.50
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : 44.70
2D Compatibility (Sec. Struct. Predict.) : 0.50
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.353

(partial model without unconserved sides chains):
PDB file : Tito_1ZWX.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1ZWX-query.scw
PDB file : Tito_Scwrl_1ZWX.pdb: