Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMINMEKETIVEVTKLGFTIQAAVKVIGKDLLITLTGGDTPHIGTVTTFSRDTEMQTVRFPSHDGRFHKDDVLAEKIAVIIKTAVPGSCTITSGIHVDHISNAQINASFPMSEELGYKILDWLEKIDFHIKEPVYYKDGEKPL
5WTQ Chain:B ((15-123))----VSLHNFSARLWEQLVHFHVMRLTDSLFLWVGA-T-PHLRNLAVAMS-----I--PVSTSLLGDTSDTTSTGLAQRLARKTNKQVFVSYNLQNTDSN------FALLVE---NRIKEEMEAFP----------------


General information:
TITO was launched using:
RESULT:

Template: 5WTQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 387 -34316 -88.67 -329.96
target 2D structure prediction score : 0.46
Monomeric hydrophicity matching model chain B : 0.60

3D Compatibility (PKB) : -88.67
2D Compatibility (Sec. Struct. Predict.) : 0.46
1D Compatibility (Hydrophobicity) : 0.60
QMean score : 0.202

(partial model without unconserved sides chains):
PDB file : Tito_5WTQ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5WTQ-query.scw
PDB file : Tito_Scwrl_5WTQ.pdb: