Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMALAESEEEFFMGLIKAATSMVGGGLADQWLEVIEPDNMSDTTVMTKGVKVRKDDKRGSNRKGTEDVLTDGTVVHVYPNMMMLLVDGGKIIDYTAEEGYYTIKNDAAPSMFNGTLKEAIAETFDRFKFGGVTPQKQQVFYINLQEIKGIKFGTSAPLNYFDNFYNAELFLRAHGTYSIHVVDPILFYTNAIPKNKTQVEINDINEQYLAEFLTALQSAINQMSADGQRISYVPSKSLELSKYMDTALDDSWRELRGMEIVSVAVASISYTDDSVKLINMRNEGAMLGDPSVREGYVQGSIARGMEAAGKNEAGAMTGFMGVGMGMNANGSYLSQAAQNNQEQIKQQAEKQNQQTAQGNADTWTCPVCGTENS----GKFCSNCGAAKPVENVQPKLQMRCSECNEIVDLSN---GIPKFCPNCGKPFKGIPVN
2JRP Chain:A ((3-66))-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ITCPVCHHALERNGDTAHCETCAKDFSL-------QALCPDCRQPLQVLKACGAVDYFCQNGHGLISKKRV-


General information:
TITO was launched using:
RESULT:

Template: 2JRP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 162 -5230 -32.28 -91.75
target 2D structure prediction score : 0.47
Monomeric hydrophicity matching model chain A : 0.55

3D Compatibility (PKB) : -32.28
2D Compatibility (Sec. Struct. Predict.) : 0.47
1D Compatibility (Hydrophobicity) : 0.55
QMean score : 0.616

(partial model without unconserved sides chains):
PDB file : Tito_2JRP.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2JRP-query.scw
PDB file : Tito_Scwrl_2JRP.pdb: