Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFKGKTILVTGGTGSIGSEIVRQLLKY-EPKAIRIYSRGEEKQFYMQQELSNHTNLRFLIGDIRDSQRIDYACRDVDIIFHAAAMKHVPASEYNPMEAVKTNVMGTQNVIDAAIKNNVKHFVGISTDKVVSPTNTMGATKLLSEKLIIAANQYKGKTETIFSCVRFGNVMGSSGSVIPLFSKQIKNN-KDITLTDVDMTRFMMSIPDAARLVLSAAMNSKFGETYVLKMPAINILTLAQSLIKIYNDTHDEKYRGEIKVVGIRPGEKLYEELMTTDEIERSYENDKMYIIPPHYHATDELYKDYEKIKITAYSSDATELMSGQEFIRIAKENNVVTW
2GN6 Chain:B ((18-298))MLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEF-NDPRMRFFIGDVRDLERLNYALEGVDICIHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKNAISQVIALSTDKAANPINLYGATKLCSDKLFVSANNFKGSSQTQFSVVRYGNVVGSRGSVVPFFKKLVQNKASEIPITDIRMTRFWITLDEGVSFVLKSLKRMHGGEIFVPKIPSMKMTDLAKALAP----------NTPTKIIGIRPGEKLHEVMIPKDESHLALEFEDFFIIQP---------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2GN6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1473 -48766 -33.11 -174.79
target 2D structure prediction score : 0.52
Monomeric hydrophicity matching model chain B : 0.82

3D Compatibility (PKB) : -33.11
2D Compatibility (Sec. Struct. Predict.) : 0.52
1D Compatibility (Hydrophobicity) : 0.82
QMean score : 0.475

(partial model without unconserved sides chains):
PDB file : Tito_2GN6.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2GN6-query.scw
PDB file : Tito_Scwrl_2GN6.pdb: