Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence------------------MAWFTLILFGLMTVATLSQKLILLTLFIAIVALIKGPVMILWGMLYSFLVGLF--PPIGILLSAIFFLLNIGTFTKNWRMTLVGIYFYFYPFGVMALSEVMHWDNHWFIAGSLLLGLILLHVMLTKLYQHYGIGRTIFWYVF-------SIPFALLTALLPSRLKTKIKGYHKIK----------------------------------------------
2DB0 Chain:A ((9-247))DIREALANGEHLEKILIMAKYDESVLKKLIELLDDDLWTVVKNAISIIMVIAKTREDLYEPMLKKLFSLLKKSEAIPLTQEIAKAFGQMAKEKPELVKSMIPVLFANYRIGDEKTKINVSYALEEIAKANPMLMASIVRDFMSMLSSKNREDKLTALNFIEAMGENSFKYVNPFLPRIINLLHDGDEIVRASAVEALVHLATLNDKLRKVVIKRLEELNDTSSLVNKTVKEGISRLLLL


General information:
TITO was launched using:
RESULT:

Template: 2DB0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 672 -74193 -110.41 -446.94
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain A : 0.59

3D Compatibility (PKB) : -110.41
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.59
QMean score : 0.172

(partial model without unconserved sides chains):
PDB file : Tito_2DB0.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2DB0-query.scw
PDB file : Tito_Scwrl_2DB0.pdb: