Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMITMDDIIREGNPTLREVAKEVSLPLSEEDISLGKEMLEFLKNSQDPIKAEELHLRGGVGLAAPQLDISKRIIAVHVPSPDPEADGPSLSTVMYNPKILSHSVQDACLGEGEGCLSVDREVPGYVVRHAKITVSYYDMNGEKHKIRLKNYESIVVQHEIDHINGVMFYDHINDQNPFALKEGVLVIE
2OKL Chain:B ((2-175))MLTMKDVIREGDPILRNVAEEVSLPASEEDTTTLKEMIEFVINSQDPEMAEKYSLRPGIGLAAPQIGVSKKMIAVHVT----DADGTLYSHALFNPKIISHSVERTYLQGGEGCLSVDREVPGYVPRYTRITVKATSINGEEVKLRLKGLPAIVFQHEIDHLNGVMFYDHINKENPFA---------


General information:
TITO was launched using:
RESULT:

Template: 2OKL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 886 -86106 -97.18 -494.86
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain B : 0.88

3D Compatibility (PKB) : -97.18
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.88
QMean score : 0.595

(partial model without unconserved sides chains):
PDB file : Tito_2OKL.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2OKL-query.scw
PDB file : Tito_Scwrl_2OKL.pdb: