Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MKLGFIGTGVMGSAVARHLLEAGHEVAVYNRTKAKADPLVTEGAIWADTPKAVAEQSNILFTMVGYPKDVEEIYYG-QSGIFSADISGHILVDLTTSTPSLAEKIAKTAKEKGADALDAPVSGGDLGAKNGTLTIMVGGEEAVYDQVLPLFKEFGTTFTLHGSAGKGQHTKMANQIMIAGTMTGMTEMLVYAQKNGLDLKKVIET------------------LSGGSAANWSLSNYSPRILKEDYTPGFFVKHFIKDLKIALEEAEKMDLVLPATTQALKLYEELADKGFENDGTQALIKLWWPEGKIPEKKS 5U5G Chain:D ((5-236)) --VGFIGLGRMGQAICRRLLASQMPVHVHNRSREKADDLIRQGAVWAPDIVALTRAARVLFVCTAGSEAVQDFYHAPDRGLLACLEVGDIVVDLSTIAPETAEGLHAAFAQQGADYIECPVSGGVEGALAGILSAIVSGRPEAYGLIRPLLEVFCATVTYVPEPGKAQRLKILNNLAESINLAGAIEVISQGLSQGLDLKSMADVFTSCRGRSAYMDVALGYALSGGASSNVSL--------------------------------------------------------------------------------

General information: TITO was launched using: RESULT: Template: 5U5G.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 1035 -91261 -88.17 -428.46 target 2D structure prediction score : 0.71 Monomeric hydrophicity matching model chain D : 0.71 3D Compatibility (PKB) : -88.17 2D Compatibility (Sec. Struct. Predict.) : 0.71 1D Compatibility (Hydrophobicity) : 0.71 QMean score : 0.531

(partial model without unconserved sides chains): PDB file : Tito_5U5G.pdb: (Unconserved sides chains are recalculated) : Sequence: align-5U5G-query.scw PDB file : Tito_Scwrl_5U5G.pdb: