Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMMNLSNRFSPRLSRIEVSKIRQFDQQISSI----PDVIKLTLGEPDFPTPEHVKQAGIAAIEEDFSHYTGMRGLEELREAACIFQQQRYGLTYDPQTEVLTTVGATEAIASALLSVLEEGDKVLIPAPAYSGYQPLVELAGAELIPIDTSDTGFVCQPEQFERAFEQYGSAV----KAVILNYPNNPTGTTLSAKQLKAIAEVLKKYPVFVISDEVYAELTYSGTHMSIATYLP--EQTIVISGLSKSHAMTGWRVGFIFAQKALIDELIKVHQYLVTAATTMSQKAAAEALINGVKDSENMKEQYQTRRDYLVQQLAPLGFEVTQPNGAFYLFCKLPAAIQTDSWQFCVELAEQAKVACIPGIAF-GPEGEGYIRISYASSMEKLHEACKRIKDFLTEQ
1O4S Chain:B ((15-388))--------SRRISEIPISKTMELDAKAKALIKKGEDVINLTAGEPDFPTPEPVVEEAVRFLQKGEVKYTDPRGIYELREGIAKRIGERYKKDISPD-QVVVTNGAKQALFNAFMALLDPGDEVIVFSPVWVSYIPQIILAGGTVNVVET------FMSKNFQPSLEEVEGLLVGKTKAVLINSPNNPTGVVYRREFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTSILDVSEGFDRIVYINGFSKSHSMTGWRVGYLISSEKVATAVSKIQSHTTSCINTVAQYAALKAL---EVDNSYMVQTFKERKNFVVERLKKMGVKFVEPEGAFYLFFK----VRGDDVKFCERLLEEKKVALVPGSAFLKP---GFVRLSFATSIERLTEALDRIEDFLNS-


General information:
TITO was launched using:
RESULT:

Template: 1O4S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 2016 -3558 -1.76 -9.80
target 2D structure prediction score : 0.73
Monomeric hydrophicity matching model chain B : 0.79

3D Compatibility (PKB) : -1.76
2D Compatibility (Sec. Struct. Predict.) : 0.73
1D Compatibility (Hydrophobicity) : 0.79
QMean score : 0.592

(partial model without unconserved sides chains):
PDB file : Tito_1O4S.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1O4S-query.scw
PDB file : Tito_Scwrl_1O4S.pdb: