Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceWFHGKLSRREAEALLQ-----LNGDFLVRESTTTPGQYVLTGLQSGQPKHLLLVDPE-GVRW----GFAMLPKLFLNS
2HDV Chain:A ((527-610))WFHGMLSRLKAAQLVLEGGTGSHGVFLVRQSETRRGECVLTFNFQGKAKHLRLSLNAAGQCRVQHLHFQSIFDMLEH-


General information:
TITO was launched using:
RESULT:

Template: 2HDV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 228 4409 19.34 65.80
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain A : 0.69

3D Compatibility (PKB) : 19.34
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.619

(partial model without unconserved sides chains):
PDB file : Tito_2HDV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2HDV-query.scw
PDB file : Tito_Scwrl_2HDV.pdb: