Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequencePVNLQEVRSNDQQLHPYRCKFEVLHIWYTEPFLSSFIDPGQRAEITIEARARKTDFAIDIDGE---CKGTKVKGAGRIPE--NWFIRLSREGSKEVQFINDKPKNNRVSGGS
5HJ1 Chain:A ((4-100))PLV-KRLREQPQNILTY---LSISPVLSGDKLLGYRLNPGKDASLFRQSGLQANDLAIALNGIDLRDQEQAQQALQNLADMTEITLTVEREGQRHDIAFAL-----------


General information:
TITO was launched using:
RESULT:

Template: 5HJ1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 328 -1863 -5.68 -20.24
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain A : 0.73

3D Compatibility (PKB) : -5.68
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.250

(partial model without unconserved sides chains):
PDB file : Tito_5HJ1.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5HJ1-query.scw
PDB file : Tito_Scwrl_5HJ1.pdb: