Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEQCYTDVTEFAIPASTQKLYLSPVLDGFNSEIIAYNLSTSPNLEQVQTMLEQAFTEKHYENTILHSDQGWQYQHDSYHQFLEGKGIQASMSRKGNSQDNGMMESFFGILKSEMFYGYEKTFKSLNQLEQAIVDYIDYYNNKRIKVKLKGLSPVQYRTKSFG
3VQ6 Chain:A ((4-149))PGIWQLDCTHL------EGKVILVAVHVASGYIEAEVIPA-ETGQETAYFLLKLAGRW-PV-KTVHTDNGSNFTSTTVKAACDWAGIKQEDGIP-------VIESMNKELKKIIGQV----RDQAEHLKTAVQMAVFIHNH-KRKGGIGGYSAGERIVDI--


General information:
TITO was launched using:
RESULT:

Template: 3VQ6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 632 -60785 -96.18 -437.30
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : -96.18
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.254

(partial model without unconserved sides chains):
PDB file : Tito_3VQ6.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3VQ6-query.scw
PDB file : Tito_Scwrl_3VQ6.pdb: