Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNQVELIQALPKAELHVHIEGTFEPELMFAIAQRNQIQIPYKSVEEVKQA-YNFHNLQSFLDIYYAGANVLVHEQDFYDLAWAYFEKCAEDRVVHTEMFFDPQTHT-DRGIAFATVINGLKRACADAKDKFGISSQLIMCFLRHLSEEAAFETLEQALPFK-EDIIAVGLDSSEVGHPPAKFERVFAKAREEGFLIVAHAGEEGP-PEYVWEALDLLKVNRIDHGVRSEEDEQLMARLINEKMPLTVCPLSNLKLCVVKD---MKDHNIRRLLQKGVHVTVNSDDPSYFGGYMNDNFFAIQQALDLTNDELKQLAINSFEASFISDEEKQKWISEIQKI
4GXW Chain:B ((21-354))-AHRAFFHALPKVELHCHLLGAVRHDTFVALAQRSGAPIERAEIDAFYARGEKPVGVLHVLRALDRY--LLTRPDDLRRIAYEYLEDAAAHNVRHAEFFWNPTGTVRVSGIPYADAQAAIVTGMRDAARDFGIGARLIPSIDREQDPDEAVAIVDWMKANRADEVAGIGIDYRENDRPPELFWKAYRDARAAGFRTTAHAGEFGMPWRNVETAVDLLHVDRVDHGYTIVDNPELCARYAERGIVFTVVPTNSYYLRTLPPDQWAERHPMRKMPGLGLKIHPNTDDPTLHKVNPSEAWELMFSHFGFTIADLKQFMLNGIDGAWVDDDTKAAWRAAWA--


General information:
TITO was launched using:
RESULT:

Template: 4GXW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1921 1478 0.77 4.52
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain B : 0.74

3D Compatibility (PKB) : 0.77
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.501

(partial model without unconserved sides chains):
PDB file : Tito_4GXW.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4GXW-query.scw
PDB file : Tito_Scwrl_4GXW.pdb: