Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MEARVIGLEK----LGKHDVELVGGKNSSLGEMISHLSNAGVSVPGGFATTADAYREFLDQS-----GLNARIQAELAELNVDDVN---------ALAETG------AKIRQWIVETPLTPGLEQEIRE------AFAA---LSNGNPD--------------------IAVAVRSSATAEDLPDAS--FAGQQ----ETFLNIRGIDNVLIAVKEVFASLFNDRAIAYRVHQGFEHSLVALSAGVQRMVRSE---TGAAGVMFTLDTESGFRDVVFITASYGLGEMVVQGAVNPDEFYLSKPLLNAGKHAVLRRNLGSKHQKMIYGEEGSAGKSVVVVDVEKQERQQFALNDHELQELAKQALIIEKHYGAPMDIEWAKDGDDGQIYIVQARPETVKSRQNVG----TM-----------E-R--------------YLLKQKGTVLCEGRSIGQRIGSGKVRIVNSIKE-MDKVQDGDVLVSDMTDPDWEPVMKRAAAIITNRGGRTCHAAIITRELGVPAIVGCGNAT------------EVLTDGQEVTVSCAEGDTGFIYEGALDFEVQRNS-------IESMPKLSFKIMMNVGNPDRAFDFAQIPNEGIGLARLEFIINRMIGVHPKALLNIESLPRETRAAVMTRTAGYASPVEFYVEKLVEGIATLAAAFADKPVIVRMSDFKSNEYA------------NLIGGKLYE--------PEEENPMLGFRGASRYISDNFRDCFELECRALKKVRDEM---G-LTNIQIMIPFVRTVSEAKRVIELLAQNGLKR----G-ENGLKVIMMCELPTNALLAEQFLEHFDGFSIGSNDLTQLTLGLDRDSGIVS--HL-------FDER----DAAVKALLSMAIHACRKA--GKYVGICGQGPSDHPDLAKWLMEQGIESVSLNPDSVLDTWFFLAEEKIKQI 5JVL Chain:D ((1-872)) -KKRVFTFGKGRSEGNRDMKSLLGGKGANLAEMS----SIGLSVPPGLTISTEACEEYQQNGKSLPPGLWDEISEGLDYVQKEMSASLGDPSKPLLLSVRSGAAISMPGMMDTVLNLGLNDEVVAGLAGKSGARFAYDSYRRFLDMFGNVVMGIPHSLFDEKLEQMKAEKGIHLDTDLTAADLKDLVEKYKNVYVEAKGEKFPTDPKKQLELAVNAVFDSWDSPRANKYRSINQITGL-KGTAVNIQSMVFGNMGNTSGTGVLFTRNPSTGEKKLYGEFLINAQGEDVVAGIRTPEDLGTM-----------------------------------------------ETCMPEAYKELVENCEILERHYKDMMDIEFTVQE--NRLWMLQCRTGKRTGKGAVRIAVDMVNEGLIDTRTAIKRVETQHLDQLLHPQFEDPSAYKSHVVATGLPASPGAAVGQVCFSAEDAETWHAQGKSAILVRTETSPEDVGGMHAAAGILTARGGMTSHAAVVARGWGKCCVSGCADIRVNDDMKIFTIGDRVIKEGDWLSL---NGTTGEVILGKQLLAPPAMSNDLEIFMSWADQARRLKVMANADTPNDALTARNNGAQGIGLCRTEHMFFAS-DERIKAVRKMIMAVTPEQ---------RKVALDLLLPYQRSDFEGIFRAMDGLPVTIRLLDPPLHEFLPEGDLEHIVNELAVDTGMSADEIYSKIENLSEVNPMLGFRGCRLGISY--PELTEMQVRAIFQAAVSMTNQGVTVIPEIMVPLVGTPQELRHQISVIRGVAANVFAEMGVTLEYKVGTMIEIPRAALIAEEIGKEADFFSFGTNDLTQMTFGYSRDDVGKFLQIYLAQGILQHDPFEVIDQKGVGQLIKMATEKGRAANPSLKVGICGEHGGE-PSSVAFFDGVGLDYVSCSPFRVPIARLAAAQV-----

General information: TITO was launched using: RESULT: Template: 5JVL.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 3920 76886 19.61 107.38 target 2D structure prediction score : 0.58 Monomeric hydrophicity matching model chain D : 0.68 3D Compatibility (PKB) : 19.61 2D Compatibility (Sec. Struct. Predict.) : 0.58 1D Compatibility (Hydrophobicity) : 0.68 QMean score : 0.374

(partial model without unconserved sides chains): PDB file : Tito_5JVL.pdb: (Unconserved sides chains are recalculated) : Sequence: align-5JVL-query.scw PDB file : Tito_Scwrl_5JVL.pdb: