Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLNLKSSHSTAFTPSSPAERYAEALASGQFMADEAQAQAVQELDRVWKELLNRYKASKKAFRRFRRQTSPKGVYMWGSVGRGKTWLMDQFYESVPFRRKTR---MHFHHFMQHVHKELNKLSGQRNPLDIVADQIYKDAVVICFDEFFVSNVTDAM---ILSDLFQKLFVRGVTLIATSNIAPDGLYKNGIH---RDRFIPTIEMVKKNCVVLNVDAGVDYRLRVLKQAQLFKSPLGNEAQSWISECYTALTHTQTNSHEPIVINNRVVETLGHTEDVLWCEFSELCLKPRSPADFIEIANIYNTVLVSNVPHLTDFLSEGTRRFIYLVDEFYDRGVKLLLTSQDSIIDIYQGEKLAFEIERTRSRLLEMQSDEYLHSEHRHIDATKTS
4M4W Chain:K ((159-304))-------------------------------------------------------------------GKGKGLYLYGKFGVGKTFMLAAIANEL-AEKEYSSMIVYVPEFVRELKNSLQDQ-----TLEEKLNM-VKTTPVLMLDDIGAES-TSWVRDEVIGTVLQHRMSQQLPTFFSSNFSPDELKHHFTYEKEEVKAARLMERILYLAAPIRLD-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4M4W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain K - contact count / total energy / energy per contact / energy per residue : 486 -9451 -19.45 -71.60
target 2D structure prediction score : 0.45
Monomeric hydrophicity matching model chain K : 0.61

3D Compatibility (PKB) : -19.45
2D Compatibility (Sec. Struct. Predict.) : 0.45
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.306

(partial model without unconserved sides chains):
PDB file : Tito_4M4W.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4M4W-query.scw
PDB file : Tito_Scwrl_4M4W.pdb: