Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSLPHVLLTSLLERPSTGFELARRFDRSMGFFWNATHQQIYRELNNMLKKGWVSTLENEM-DSGRKKTYQVEQLGRIELASWMTQQSEPAQLRDDLMVRLRAEAQLGNNQILPELLRHLGLHQEKLKLYQTIYDKDFKDSDDLNNRVLYIHKMILELGITMETEWIKWLEQVIPQLKLFAQDNVSGE
3L9F Chain:A ((35-203))MQGKDIILGILSKKERSGYEINDILQNQLSYFYDGTYGMIYPTLRKLEKDGKITKEVVIQDGRPNKNIYAITESGKKELASYLQSDVNDEIFKSDFLMRLFFGNSLNDDDLEQLIREEIERKEEKIKRLSENLEIWKKKG-----ELTPTQEITIKYGLAQYKSTKKVLEEELA-------------


General information:
TITO was launched using:
RESULT:

Template: 3L9F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 476 -13529 -28.42 -80.53
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain A : 0.72

3D Compatibility (PKB) : -28.42
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.72
QMean score : 0.347

(partial model without unconserved sides chains):
PDB file : Tito_3L9F.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3L9F-query.scw
PDB file : Tito_Scwrl_3L9F.pdb: