Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MRTNKRQTNLKDIKASFQQSGYVDWHFNPRLSDSQNEDHDGEVVVQTAPPELKRPPLYAVVLLNDDYTPMDFVIEILQQYFAMNLDQATQVMLTVHYEGKGTAGVYPRDIAETKANLVNNYARSQGHPLLCQIEPKA 1MBU Chain:D ((22-104)) ---------------------------------------------------LKPPSMYKVILVNDDYTPMEFVIDVLQKFFSYDVERATQLMLAVHYQGKAICGVFTAEVAETKVAMVNKYARENEHPLLCTLE---

General information: TITO was launched using: RESULT: Template: 1MBU.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 314 -62868 -200.22 -757.45 target 2D structure prediction score : 0.65 Monomeric hydrophicity matching model chain D : 0.82 3D Compatibility (PKB) : -200.22 2D Compatibility (Sec. Struct. Predict.) : 0.65 1D Compatibility (Hydrophobicity) : 0.82 QMean score : 0.532

(partial model without unconserved sides chains): PDB file : Tito_1MBU.pdb: (Unconserved sides chains are recalculated) : Sequence: align-1MBU-query.scw PDB file : Tito_Scwrl_1MBU.pdb: