Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQQSRCNSIKDHLEFGSMNNMKYTYKPNYFFFAHKLVLFLKDYLLKHP---TEQNTTFNLQTIYDVFSHDLASSTTNLE-GILNIADE-YVLETEE------------GLLPLISSHSINLKNHVLSLEFSPKALTSLLSGRSLVNPKAA
2NRA Chain:C ((30-147))------------------------------LPAKRVMYMALALIDSKEPLERGRVFKIRAEDLAALAKITPSLAYRQLKEGGKLLGASKISLRGDDIIALAKELNSEELDLNIIEWIAYSPDEGYLSLKFTRTIEPYISS----------


General information:
TITO was launched using:
RESULT:

Template: 2NRA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 249 -13646 -54.80 -146.73
target 2D structure prediction score : 0.55
Monomeric hydrophicity matching model chain C : 0.65

3D Compatibility (PKB) : -54.80
2D Compatibility (Sec. Struct. Predict.) : 0.55
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.517

(partial model without unconserved sides chains):
PDB file : Tito_2NRA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2NRA-query.scw
PDB file : Tito_Scwrl_2NRA.pdb: