Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSEKISRRELIQKSLLGFGALSIPVAFTGCNDGSDDESPEIQADFLHGVASGDPLQDKVILWTRVTPTVSGVRLKVVWEISTDNQFKQNLKTGMVETSKTDDFTVKVDAAGLQADTVYYYRFKFGNKVSPVGQTKTLPTSTNKVSFAVCSCSNYPAGYFYVYREMAKQNVDVIIHLGDYIYEYGADGYATEDAIKLGRNLPADNNKEIIKLNDYRKRYALYRQDKDLKAAHQRHPFIVIWDDHELANDAWREGAENHQSNEGVFSDRKLAALQAYFEWMPIRPVSSTDHLNIYRQFNF---GSLVQLTMLDTRIIARDKQLAYADYMTTTGLDIAKFQADLTNPVRTLMGYTQRDWLVDKLKQST--ATWNVVGQQVLMSKMWIPAELLASLGQITSGGTSPDALAKMNAQITELVALKLRLQQNDPTLTAQEKARIMTVAPYNLDAWDGYYAEREFVYDKLAEFNK-KIIVLAGDTHNAWASYLYSQKGKYVGVELATSSVSSPGLEKYLSIPLAQLQQFEFAFTTLIDELVYCNLNQRGYLLVTLDQVQVHSEWRFVDSIKNTEYQIDSSRQNDIVLDLNLMPLKQGQKTA
5FC1 Chain:A ((85-306))-----------------------------------------------------------------------------------------------------------------------------------------------------------------------QEASFMIWTGDSPPHVPVPEL---------------------STGTVIKVITNMT--MTVQNLFPNLQVFPALGNHDYWPQDQLPIV------T-SK--VYSAVADLWKPWLGEEAIS-TLKKGGFYSQKVASNPG-LRIISLNTNLYYGPNI---------------------M-TLNKTDPANQFEWLENTLNSSLWNKEKVYIIAHVPVGYLPYA---------------------------------------------------------TDTPAI--RQYYNEKLLDIFRRYSSVIAGQFYGHTHRDSLMVLSDKNGNPLNSVFVAPAVTP-----------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5FC1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1116 -39521 -35.41 -182.97
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain A : 0.57

3D Compatibility (PKB) : -35.41
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.57
QMean score : 0.421

(partial model without unconserved sides chains):
PDB file : Tito_5FC1.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5FC1-query.scw
PDB file : Tito_Scwrl_5FC1.pdb: