Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNLLKVCTLLPCSLVIAACSVNSSSTPPTLSSSTPQVQKSSIEISCQDLQNPAYRQAVLNAINQIRQDSRQCGQ---------QYF---SAAKPLSWNNNLYQGANAHSKDMANNNFLGHVGSTGLDLRARLKKYHMLSKANGENVASG--------QKTLNEVLAKWIA-----------------SPLHCSNIMNPRYTEYAIACASDQSAK-QRSYWTQQFAGF
4G2U Chain:A ((14-172))-------------------------------------------------QTDEARKIFLDFHNQVRRDIAGASPLLNLAVQMRNVLGPAKNMYRMDWDCNLEAKAKAMIWPCTTPLPI--DT------------------SIPQNLAQWLLFQNSQENEVLTQTPWSWVTASLRNLQPDTEANIYNWQIRPLSNIANWQNLKVGCAHKVCKFPTGTNMVVSCAYGG-


General information:
TITO was launched using:
RESULT:

Template: 4G2U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 292 3133 10.73 26.32
target 2D structure prediction score : 0.55
Monomeric hydrophicity matching model chain A : 0.60

3D Compatibility (PKB) : 10.73
2D Compatibility (Sec. Struct. Predict.) : 0.55
1D Compatibility (Hydrophobicity) : 0.60
QMean score : 0.258

(partial model without unconserved sides chains):
PDB file : Tito_4G2U.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4G2U-query.scw
PDB file : Tito_Scwrl_4G2U.pdb: