Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMWCFKNGQPVE----TIPLLDRAFHYGDGCFTTIRVFQNKIELKARHWERLKLACQKLSLV--ADFELIEQSLQRLQNQNLVLNGTLKIVISRGEGDRGYS-LPKHAADIYI---WFYPKALEQFQPDFIQCGVLNQALGLTMPSLVGLKSLNRLEQVLLKKEADQQGWVEALVTDVQGYIVEGVSSNCFIRLNDRWITPELRYNGVHGVMRAEILVRMQHYGIACEVRIIELDEVPQIQSLFFCNALHPMRVVTQISEQILESQACLNLFHTLNLNQIH
3DAA Chain:A ((1-259))GYTLWNDQIVKDEEVKIDKEDRGYQFGDGVYEVVKVYNGEMFTVNEHIDRLYASAEKIRITIPYTKDKFHQLLHELVEKNELNTGHIYFQVTRGTSPRAHQFPENTVKPVIIGYTKENPRP-LENLEKGVKATFVEDI----RWLRCDIKSLNLLGAVLAKQEAHEKGCYEAIL-HRNNTVTEGSSSNVFGIKDGILYTHPANNMILKGITRDVVIACANEINMPVKEIPFTTHEALKMDELFVTSTTSEITPVIEIDGKLIRDG---------------


General information:
TITO was launched using:
RESULT:

Template: 3DAA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1212 15180 12.52 60.96
target 2D structure prediction score : 0.47
Monomeric hydrophicity matching model chain A : 0.69

3D Compatibility (PKB) : 12.52
2D Compatibility (Sec. Struct. Predict.) : 0.47
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.433

(partial model without unconserved sides chains):
PDB file : Tito_3DAA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3DAA-query.scw
PDB file : Tito_Scwrl_3DAA.pdb: