Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MTKHQFKLSDPRLLSRIGYQFKQPELLQLALTHRSVSHKYNYERLEFLGDSLLGMIIANYLYHAYPHENEGRLTRMRATLVRQEALGKIATDLQLSRCLILSTGELKSGGHHRESILADTVEAIIGAIYLDSS-DLNLLKDIVLKWYTP-YLDHIEPTDQLKDPKSRLQEYLQARKKPLPVYEVVDIQGDAPHQHFKVECLVDGLSKIHGEGASRRFAEQAAAAEILKLLEQ 1YYW Chain:C ((6-219)) -----------QLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGKI------NETIIGDVFEALWAAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEGPHHKKKFIVEAKIKEYRTL-GEGKSKKEAEQRAAEELIKLLEE

General information: TITO was launched using: RESULT: Template: 1YYW.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 894 -39136 -43.78 -184.60 target 2D structure prediction score : 0.66 Monomeric hydrophicity matching model chain C : 0.82 3D Compatibility (PKB) : -43.78 2D Compatibility (Sec. Struct. Predict.) : 0.66 1D Compatibility (Hydrophobicity) : 0.82 QMean score : 0.431

(partial model without unconserved sides chains): PDB file : Tito_1YYW.pdb: (Unconserved sides chains are recalculated) : Sequence: align-1YYW-query.scw PDB file : Tito_Scwrl_1YYW.pdb: