Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNMTFIVAVQLKDSIVVAVDNKYLTLKDKEKDHFEEHFSSKLYAWHS--GIITGTGEHYVIDKAVRLFINSADADIEKLPLCLNISRQIREMEVGQHEQIQSSKLLYSQYSENGAKLFAIEPTEETGKYQRTEFKENDLIIWLFNPNIQSISGNLKTLYSNPRPKVSFDRIEDWLDYYISAIAEIYEKQSCIDSWMSGSFDIFFQTEGEYFYKHIQNNPTVHLE
1OFH Chain:G ((1-80))---TTIVSVRRNGQVVVGGDGQVSL----G-NTVMKGNARKVRRLYNGKVLAGFAGGTADAFTLFELFERKLEMH--QGHLLKSAVELAK--------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1OFH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain G - contact count / total energy / energy per contact / energy per residue : 225 -11970 -53.20 -153.46
target 2D structure prediction score : 0.53
Monomeric hydrophicity matching model chain G : 0.58

3D Compatibility (PKB) : -53.20
2D Compatibility (Sec. Struct. Predict.) : 0.53
1D Compatibility (Hydrophobicity) : 0.58
QMean score : 0.193

(partial model without unconserved sides chains):
PDB file : Tito_1OFH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1OFH-query.scw
PDB file : Tito_Scwrl_1OFH.pdb: