Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAIQLKLRKKELILNSRILLSSPHMGGTEEKYVAKAFKDNWIAPLGENVDKFEESITKYTGSKGGASALSSGTAAIHLALRLLNVGKNDIVFAPSFTFIATVNPILYQGAVPVFIDSEPNTWNMSPVALESALEEAERNNQLPKAIIVVNLYGQMADYERILAIANQFNVPVIEDAAESLGSTYKGISSGLFGTIGIYSFNGNKIITTSGGGALVSSDKKYVEHSRFLATQARDQAPYYQHSEIGYNYRLSNISAGIGRGQMEVLNDRVAKRREIFNRYKEAFSGIDRIEMMPEVDGMVPNR---WLSTLTINDYNSI--DQVVNVINKLNEKNIETRALWKPLHLQPVFQGVKMYYHDNNLSVSEKLFNSGLCLPSGSNMTDSEQEFVIDEFKKIFK
3DR4 Chain:C ((26-390))----------------RISVAAPRLDGNERDYVLECMDTTWISSVGRFIVEFEKAFADYCGVKH-AIACNNGTTALHLALVAMGIGPGDEVIVPSLTYIASANSVTYCGATPVLVDNDPRTFNLDAAKLEALITPRT------KAIMPVHLYGQICDMDPILEVARRHNLLVIEDAAEAVGATYRGKKSGSLGDCATFSFFGNAIITTGEGGMITTNDDDLAAKMRLLRGQGMDPNRRYWFPIVGFNYRMTNIQAAIGLAQLERVDEHLAARERVVGWYEQKLARLGNRVTKPHV--ALTGRHVFWMYTVRLGEGLSTTRDQ---VIKDLDALGIESRPVFHPMHIMPPYA----HLATDDLKIAEACGVDGLNLPTHAGLTEADIDRVIAALDQVL-


General information:
TITO was launched using:
RESULT:

Template: 3DR4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 2191 -174817 -79.79 -485.60
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain C : 0.79

3D Compatibility (PKB) : -79.79
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.79
QMean score : 0.507

(partial model without unconserved sides chains):
PDB file : Tito_3DR4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3DR4-query.scw
PDB file : Tito_Scwrl_3DR4.pdb: