Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSTSEAEGSISGSGTLRGRACASGGAGKFDKAMKMYQKSMAIRRRLKSMASSTTRSLGDRDDDGFGGGALNEESAAAQTSLSPLRGPMLRSSTQITRVAPASSIASLASPQHSRVLPEMAFGVATASERTAMASQPAIALDAGSSVETRSSMAALMLYSHVPLPALNSFKRLSDPPDVERETAPSSSSPFSLAIPSRGRTKGGSGNRHKKVDASGGENDAVWRKRSPTCSAHLDFPYRFSAERQRTASRHNSGGTSEGFGVGIHKYAGQPSTSTVDSPLLSPMPSFHQMMGRSYDVPALNAIFRGFSNGVDRWQQDSRLLRSPPSPTHATMPAAPPTSVPSVSTSLQLSSSLVSKMSVPPPAAAVTRQIPTVSVSSSAETTAAADVHAMPAGNDAFSYLGPRLSAQAPSRKDRSNSYPADKARPEASGRSTVEGRDGVHASGSLPLVKTMASAPNLKPNEASVLPLGPPPLDESSAATTTTAQFYSTALLAKTFDGAQYLNDYILLNEIGSGSTGRVVLAFSTSMNKSVAIKIILKPKEKYRLQHRVSASPSTSVLGQHSSGGTFSGGRAATALATTTPEAMQNFKSSSSSARRRSKHRQTPSTPFTTAADKTRNLQREVEVMKDLNHPNIVRLYEVINDPKANSLFLVLQYVDNGAVAQLDSTGHIRAPLHPWTVLPIAAQISDGLVYLHEQHIVHRDIKPENILVNRDG-HAFLADFGVAELMSAKAGQP-TAATLTYQGTPLFMAPEIYAGVDDEDRDEDAEQAPGRCTRRRSSNDADESSNMTASPLCEERRDSRVIDPFALDVWALGVTFYTLLIGHVPFTSMLQIS---QTVEK---GVNIPASLPEQWRTVLRRMMEPRQELRISSAELCHMLHAMLAEQEAAEVRAGGRSRKASLSTRSRSATLGNPRKASHQCCAEGRMARSASLAADAEEESMNLGSSSSSDESGTSGYSKGILGLSITSVGLNILRPTRIRKKQELSCRES
4IDV Chain:A ((73-334))-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VHWATHQLRLGRGSFGEVHRMEDKQTGFQCAVKKVRLEV----------------------------------------------------------------------------FRAEELMACAGLTSPRIVPLYGAVRE--GPWVNIFMELLEGGSLGQLVKEQ---GCLPEDRALYYLGQALEGLEYLHSRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRS---------------------------------------------CDAKVDVWSSCCMMLHMLNGCHPWTQFFRGPLCLKIASEPPPVREIPPSCAPLTAQAIQEGLRKEPIHRVSAAELGGKVNRALQQV---------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4IDV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1338 -109763 -82.04 -432.14
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain A : 0.59

3D Compatibility (PKB) : -82.04
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.59
QMean score : 0.474

(partial model without unconserved sides chains):
PDB file : Tito_4IDV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4IDV-query.scw
PDB file : Tito_Scwrl_4IDV.pdb: