Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMMFNEAAVPFIQTARDNGLLFGGSNVPAMIDYTSEHRKSYHVRGSVFEVAPHFEVLNGIGYGAYGVVCAAVDLRLVASSVYYNEAMRIIEEGGRIVTRQRRGHDAPVYFRTRAVLDEAGRGGPVRVPHLYSEPFKRRVLACGGVSPFVAIKKVTKVFDDLVDGRRILREIKLLRYLQGHPNIVRLMEVGRPHVPTGASSSAAFDDIYLVTDLMDTDLAALLKSSQEIEMDQFRFIAYQLMKVLVYVHSSGVIHRDLKPGNILLNGNCDMKLCDFGLSRGGVPAWPHESTLTAVATAAESSAKELEDWGLFCWSSSAVRGASSAPHAAKQPPLYSLTDYVVTRYYRAPELLIM-GRYNHAIDMWSAGCILAEMLLRRPLFTGANYLSQLA-----------------LILETPGLRGVPQTPEQVAALFEGGEEGKHFINDILFRKTARGRDSLTLSNQVHSQVLFHSTLFGFNVDIPISLGILIAKLLSFDPRKRPTAVEALRDPFFRPLYDSRDEILRCPASDPSVEREEIDDIAAYQKAHPCVVVDESPVFTWEFDH-RITSAQALRSLFEEECQISRDVQQQIERQQRPR
3N9X Chain:B ((22-411))----------------------------------------------VHVPDNYIIKHLIGRGSYGYVYLAYDKN------------------------------------------------------------------TE---KNVAIKKVNRMFEDLIDCKRILREITILNRLK-SDYIIRLYDLIIPDD------LLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTIN-------------------------------------------------------SHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFPGSSCFHEKSNRDQLNIIFNIIGT---PT-EDDLKN--I-KPEVIKYIKLFPHRK--------------P----I--NLKQKYPSISDDGINLLESMLKFNPNKRITIDQALDHPYLKDVRKKKLE---TKK------------------------------IILPFDDWMVLSETQLRYIFLKEVQSFHPEL----------


General information:
TITO was launched using:
RESULT:

Template: 3N9X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1590 -144894 -91.13 -443.10
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain B : 0.65

3D Compatibility (PKB) : -91.13
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.447

(partial model without unconserved sides chains):
PDB file : Tito_3N9X.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3N9X-query.scw
PDB file : Tito_Scwrl_3N9X.pdb: