Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAKVLLGFMGAGKSTIAR----GLDPNYLDMDALIEKRLGMSIANFFAEKGEAAFRQVESEVLADL--LQTDQVVSTGGGVVISQRNRDLLKTNTDNIYLKADFETLYLRIVADKDNQRPLF--LNNSKEELVAIFQERQAWYEEVASRVLDVTKLSPEEIIEELR
3N2E Chain:B ((5-145))---VLIGFMGSGKSSLAQELGLALKLEVLDTDMIISERVGLSVREIFEELGEDNFRMFEKNLIDELKTLKTPHVISTGGGIVMHENLKGLGTT----FYLKMDFETLIKRLNQKERAKRPLLNNLTQAKE----LFEKRQALYEKNASFIID--------------


General information:
TITO was launched using:
RESULT:

Template: 3N2E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 493 -15772 -31.99 -118.59
target 2D structure prediction score : 0.50
Monomeric hydrophicity matching model chain B : 0.82

3D Compatibility (PKB) : -31.99
2D Compatibility (Sec. Struct. Predict.) : 0.50
1D Compatibility (Hydrophobicity) : 0.82
QMean score : 0.487

(partial model without unconserved sides chains):
PDB file : Tito_3N2E.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3N2E-query.scw
PDB file : Tito_Scwrl_3N2E.pdb: