Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIEYKNVALRYTEKDVLRDVNLQIEDGEFMVLVGPSGSGKTTMLKMINRLLEPTDGNIYMDGKRIKDYDERELRLSTGYVLQAIALFPNLTVEENIALIPEMKGWTKEEIAQKTEELLAKVGLPVAEYGHRLPSELSGGEQQRVGIVRAMIGQPKILLMDEPFSALDAISRKQLQVLTKELHKEFGMTTIFVTHDTDEALKLADRIAVLQDGEIRQVSNPETILKAPATDFVADLFGGSIHD
3PUZ Chain:B ((4-235))-VQLQNVTKAWGEVVVSKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLETITSGDLFIGEKRMNDTPPAER--GVGMVFQSYALYPHLSVAENMSFGLKLAGAKKEVINQRVNQV-AEV-LQLAHLLDRKPKALSGGQRQRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYHYPADRFVAGFIG-----


General information:
TITO was launched using:
RESULT:

Template: 3PUZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1161 -155702 -134.11 -671.13
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain B : 0.84

3D Compatibility (PKB) : -134.11
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.84
QMean score : 0.520

(partial model without unconserved sides chains):
PDB file : Tito_3PUZ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3PUZ-query.scw
PDB file : Tito_Scwrl_3PUZ.pdb: