Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSQKLYNMKFAAVYLALIAKVERKGGKAESVHQVTSWLTGYEVSDVLACLDRDVTYGDFFRQAPYYVPERIAITGKICGVRIEEIDDPLMQEIRRLDKLVDWLAKGKTSQQVLEKYEKHK
3CU4 Chain:A ((67-82))------------------------MIPPADALKIGEYVVA--------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3CU4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 7 -869 -124.07 -54.28
target 2D structure prediction score : 0.88
Monomeric hydrophicity matching model chain A : 0.53

3D Compatibility (PKB) : -124.07
2D Compatibility (Sec. Struct. Predict.) : 0.88
1D Compatibility (Hydrophobicity) : 0.53
QMean score : 0.664

(partial model without unconserved sides chains):
PDB file : Tito_3CU4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3CU4-query.scw
PDB file : Tito_Scwrl_3CU4.pdb: