Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKNFRVKREKDFKAIFKEGTSFANRKFVVYQLENQKNHFRVGLSVSKKLG-NAVTRNQIKRRIRHIIQNAKGSLVEDVDFVVIARKGVETLGYAEMEKNLLHVLKLSKIYREGNGSEKETKVD
2LJP Chain:A ((6-115))FPRELRLLTPSQFTFVFQQPQRAGTPQITILGRLNSLGHPRIGLTVAKKNVRRAHERNRIKRLTRESFRLRQHELP-AMDFVVVAKKGVADLDNRALSEALEKLWRRHCRL-------------


General information:
TITO was launched using:
RESULT:

Template: 2LJP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 396 -8652 -21.85 -79.38
target 2D structure prediction score : 0.77
Monomeric hydrophicity matching model chain A : 0.74

3D Compatibility (PKB) : -21.85
2D Compatibility (Sec. Struct. Predict.) : 0.77
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.602

(partial model without unconserved sides chains):
PDB file : Tito_2LJP.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2LJP-query.scw
PDB file : Tito_Scwrl_2LJP.pdb: