Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSDLPQNDEYDRRFAGVAKIYGDSSFQHYEQSHVMVIGIGGVGSWAVEALARTGIGEITLVDMDVVAASNVNRQLPAMTSTLGCEKVEIMAERCRQINPRIKVNIIDDFLTPENVAELLNPVPDIVLDCIDDVKAKLALMLHCRFNKIPLIVSGGAGGKLDPLKIRVADLSKTEQDPMLAKLRSQLRAR-GICKKPKEKFGITCIYSIDN---PFSSADVCPSAGLRCGGYGSAVVVTSSFAMIAVAEVLKKLDLKKA
4D7A Chain:C ((6-265))------SDAWRQRFGGTARLYGEKALQLFADAHICVVGIGGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVDDFVTPDNVAQYMSVGYSYVIDAIDSVRPKAALIAYCRRNKIPLVTTGGAGGQIDPTQIQVTDLAKTIQDPLAAKLRERLKSDFGVVKNSKGKLGVDCVFSTEALVYP---------------GFGAATMVTATFGFVAVSHALKKMMAKAA


General information:
TITO was launched using:
RESULT:

Template: 4D7A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 1338 -168535 -125.96 -723.32
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain C : 0.84

3D Compatibility (PKB) : -125.96
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.84
QMean score : 0.575

(partial model without unconserved sides chains):
PDB file : Tito_4D7A.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4D7A-query.scw
PDB file : Tito_Scwrl_4D7A.pdb: