Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTKKGSFMPASTSQYYTRTAQILHWVMAIIFITAWVIGFYSGNFLSYDVDGSFKGDVITLHKNIATTIIFLVVIRLFWRYTHPAPQLPDTMSPTMKTLAHIGHLLLYVILVALPVTGCLFSWSAGHPAP-VL-YLFEIPRLVQDNPELLAIVKPLHIYISWFAGFLIVGHVLAALKHHFVDKDNVLNSMTKQPK
3CX5 Chain:N ((38-106))-----------------------------------------------------------------------------------------------------------LCLVIQIVTGIFMAMHYSSNIELAFSSVEHIM----RDVHNGYILRYLHANGASFFFMVMFMHMAKGLYYGSY--------------


General information:
TITO was launched using:
RESULT:

Template: 3CX5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain N - contact count / total energy / energy per contact / energy per residue : 126 -18433 -146.29 -275.12
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain N : 0.52

3D Compatibility (PKB) : -146.29
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.52
QMean score : 0.189

(partial model without unconserved sides chains):
PDB file : Tito_3CX5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3CX5-query.scw
PDB file : Tito_Scwrl_3CX5.pdb: