Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence------MELNLK------EDWSKKMK-TALNRTPASFPVRRMDYNFEDTPRYWCNHEPSLTHYFTGLSTLFPEGESYFVRSVRALRAKAKENEILDREIGAFIGQEAMHSKEHHAFHVSAQQYGLNPESLE---KATGIVLKAIEKVFSKKWNLLVTVGLEHYTAVL-VVSMMQSVNELMTENTIRNLWLWHSVEETEHKAVAYDLYQHLYGNGLDAYIPRVGIFTFSLVLITAFSTIYHIVLMKRDKQLTNFKTWRNFFKFASKQYKVLIPKFLEYYRFDFHPNQ-TDEKALVAATKVKLGINDRSLLLS
4RHJ Chain:A ((19-318))SHMFSKFLMNVKGVTPRGSDWANRLGPVALFGYGAGMPRRAPLLDFFLQSPRDCDHYAELTIHDKG-PIECPPETVMFMPVLNC-------GQMLDEAAGTETPTSDEWYLGSLEASTELLEKGYVPVSVGGDGSATLSMVEAYKRLFPSD-----DIVIVHFSARPSVSDPRSPLRVLLDKGLLKGVVSVGNRQVSSEDRKVRKLHKMFYMDMRD---IRNDYPVFISIDASVLDPAFAPAV---DSPVAGGLSTRDLLHIMNG---IRGPKVVGIDVYGYNPDLDVYRKDNVGLTAIALSKIIKEGILK


General information:
TITO was launched using:
RESULT:

Template: 4RHJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1448 13683 9.45 50.49
target 2D structure prediction score : 0.39
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : 9.45
2D Compatibility (Sec. Struct. Predict.) : 0.39
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.203

(partial model without unconserved sides chains):
PDB file : Tito_4RHJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4RHJ-query.scw
PDB file : Tito_Scwrl_4RHJ.pdb: