Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFKNRFFNTMQIQNQVQLKPFNTLSLDVTASHYTKVKSIEDIEEAL----AFAKEHELNVLVLSGGSNMLLPQQINAL-VIHLDIQGIDVLSEDQDFIRVKVGAGQVWHDFVLYTTKQNWFGLQNLALIPGLVGASPVQNIGAYGVEVGEFIESVQVYDRLLKQTGSISAADCHFSYRHSIFKDEPARYIIT---HVTFKLLKQA-NLKLNYGDLKQAV----GDNLTAENLQNQVIHIRQSK--LPDPKEYP--NVGSFFKNPIVNTQEFERLIAQFST-----IPHYPQANGNVKIAAGWLIDQAGWKGKQLGVVG-----MFHKQALVLVNYANASLADVKKTYQAVQHDVEQRFQIMLEPEPVLYNNLGLIENHTE
5JZX Chain:C ((46-404))------FAGAHIAEAVPLAPLTTLRVGPIARRVITCTSAEQVVAALRHLDSAAKTGADRPLVFAGGSNLVIAENLTDLTVVRLANSGITI---DGNLVRAEAGA--VFDDVVVRAIEQGLGGLECLSGIPGSAGATPVQNVGAYGAEVSDTITRVRLLDRCTGEVRWVSARDLRFGYRTSVLK-----AVPTVVLEVEFALDPSGRSAPLRYGELIAALNATSGERADPQAVREAVLALRARKGMVLDPTDHDTWSVGSFFTNPVVTQDVYERLAGDAATRKDGPVPHYPAPDG-VKLAAGWLVERAGF-GKGYPDAGAAPCRLSTKHALALTNRGGATAEDVVTLARAVRDGVHDVFGITLKPEPVLIGCM--------


General information:
TITO was launched using:
RESULT:

Template: 5JZX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 1818 -24002 -13.20 -73.40
target 2D structure prediction score : 0.52
Monomeric hydrophicity matching model chain C : 0.79

3D Compatibility (PKB) : -13.20
2D Compatibility (Sec. Struct. Predict.) : 0.52
1D Compatibility (Hydrophobicity) : 0.79
QMean score : 0.443

(partial model without unconserved sides chains):
PDB file : Tito_5JZX.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5JZX-query.scw
PDB file : Tito_Scwrl_5JZX.pdb: