Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPPRIRRSVMRQFTSLQVAILALGSLCFSTAYADSTLVPMSDAELSATRGQALMSMSYIAPNDSANLEKLRDSSSNVGFYKLGLEAELEINANIRKLQLGCGGVNGAGGCDIDFDNVSLSGVADTREGRV---ASDAKLTNPFLEFAIKNPNSASTREVAGIRLSAEAVEG-----LLTIGTENSATPNGINSLSGY--MVVAPQVGEATVDAARITQTGSPACGVYPSPAGCGVNQAITGKARGKIALGAGFNLDFQTKSYDITLTPTQKAQLSLPQSVVSGQRMSSVNLLASAIVNGIDLSGTLAADVDILGGITLNGNLRGTINNLPVTVPLLENLGYIHKINLSGSPLSLSMQGQDIRWPGTVSTAMRGWWLELSNPIDIGRIDPTNSVVIKTDTIRDALTEVSKELTQNPLNCGFLAVNCIGGDFNVGTRDLSNARPALLELQNLQLANQSFAPNCYGSLKFC
5B5Z Chain:A ((15-277))------------------------------------------------------------------------------------------NVTLTAVKKAFPDA---------LTNAELVAMVSKRLSQFGYHKYNTLLATSLCSDEVTRPLEQDFGEVYGKHFTMGGLAGFPFGGLTGFGAMAGAIPDGGSCLLIYGSHVGVSWEGKWGTVARRGREKGGACC-----GSAVAAAQAVTQAYQATPLDAQQGYVRDMLRPYAATLSEAEDVMVTLPVSVYDAQQKLVTRILDEGSNH-IDGDG----QIAVVGGIQINTPKEMSDFFVVRRFCIRDSSGNMVENFMPL-----------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5B5Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1251 20309 16.23 88.30
target 2D structure prediction score : 0.40
Monomeric hydrophicity matching model chain A : 0.58

3D Compatibility (PKB) : 16.23
2D Compatibility (Sec. Struct. Predict.) : 0.40
1D Compatibility (Hydrophobicity) : 0.58
QMean score : 0.011

(partial model without unconserved sides chains):
PDB file : Tito_5B5Z.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5B5Z-query.scw
PDB file : Tito_Scwrl_5B5Z.pdb: