Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence ---------------MITANKGEWSEVYA-------LFKLLSE--GKLYAGDKDLNKIPNLIYPIISILRQ-ESQDLLTYSPEPNHGVVHIQN--GTSTFTISQSD------------------FKGITELLLTEIKKKQPTASFSIP--------------------EVETFISQ-------YNSKKIKAKS----------SAKSDIRIIIYDQKIGTTPELGFSIKSKLGKASTLLNASQATNFVYKVKNLTLSPQEIDDFNQLEFTVPIIQGRIH-------HLESLGGSVEFSHITNDVFNNNL-ILLDSLLPNIISEALYKYYTSPI-----------TSVKEIFEQVASANP--------------------------IHYSLQHQHPFYEYKVKKLLCEI-------AIGMMPSTVWTGNNIDATGGYLVIKEDGDVICYHLYHRHEFEEYLYNNTRFEAASKSRHNYGNLFIENGELYMTLNLQIRFK-------- 5MB9 Chain:A ((23-578)) GERVVIGITFGNSNSSIAHTVDDKAEVIANEDGDRQIPTILSYVDGDEYYGQQAKNFLVRNPKNTVAYFRDILGQDFKSVDPTHNHASAHPQEAGDNVVFTIKDKAEEDAEPSTLTVSEIATRYLRRLVGAASEYLGKKVTSAVITIPTNFTEKQKAALIAAAAAADLEVLQLISEPAAAVLAYDARPEATISDKIIVVADLGGSRSDVTVLASRSGMYTILATVHDYEYHGIALDKVLIDHFSKEFLKKNPGAKDPRENPRSLAKLRLEAESTKRALSRSTNASFSVESLIDGLDFASTINRLRYETIARTVFEGFNRLVESAVKKAGLDPLDVDEVIMSGGTSNTPRIAANFRYIFPESTRILAPSTDPSALNPSELQARGAALQASLIQEFETEDIEQSTHAAVTTMPHVTNAIGVVSVSKFVPIIAPETAVPARRTVHGGDVLVKVVEGSTHINVIKREKVWKIGSTLAEAAVRGVKKGAKVEVTINVNTDLTVIVTAREV

General information: TITO was launched using: RESULT: Template: 5MB9.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1922 42734 22.23 117.72 target 2D structure prediction score : 0.46 Monomeric hydrophicity matching model chain A : 0.64 3D Compatibility (PKB) : 22.23 2D Compatibility (Sec. Struct. Predict.) : 0.46 1D Compatibility (Hydrophobicity) : 0.64 QMean score : 0.147

(partial model without unconserved sides chains): PDB file : Tito_5MB9.pdb: (Unconserved sides chains are recalculated) : Sequence: align-5MB9-query.scw PDB file : Tito_Scwrl_5MB9.pdb: