Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRFKDMKRG-NLMKKISNEI--QILAETLTLPKVVIEQMIVQAKNILDEVFEQYSHELMDPNK---------------AKATAKKIDKVYEEEPFAALAIYLYAASQSWKKIYQP------LKIPRTIYLATMNAFTRFIHEHFQVTGSYRFDRGFWIWHYTSGLIFRIGELE-YEMTYF----PKGYTDLRLEGKQCLSLHIPSDADLSQN-KIRDSYESAIRFFELYFPDYHYQVMYTDTWLLSPNLTKWLKKE------SKICLFAADYRLLSVDEQDDSGVPWIFGRVDAQIHD----YPESTSLQRQAKEQLLAGEHIGSGLGILTS---
4BFA Chain:A ((22-338))---ASMRVLLAPMEGVLDSLVRELLTEVNDYDLCITEFVRVVDQLLPVKVFHRICPELQNASRTPSGTLVRVQLLGQFPQWLAENAARAVELG---SWGVDLNCGCPS-KTVNGSGGGATLLKDPELIYQG-AKAMREAVPAHLPVSVKVRL--GWDSGEKKFEIADAVQQAGATELVVHGRTKEQGYRAEHIDWQAIGDIRQRLNIPVIANGEIWD-WQSAQQCMAISGCD---AVMIGRGALNIPNLSRVVKYNEPRMPWPEVVALLQKYTRL--EKQGDTGL-YHVARIKQWLSYLRKEYDEATELFQHVR-VLNNSPDIARAIQAIDIEKL


General information:
TITO was launched using:
RESULT:

Template: 4BFA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1597 -9057 -5.67 -33.05
target 2D structure prediction score : 0.42
Monomeric hydrophicity matching model chain A : 0.68

3D Compatibility (PKB) : -5.67
2D Compatibility (Sec. Struct. Predict.) : 0.42
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.275

(partial model without unconserved sides chains):
PDB file : Tito_4BFA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4BFA-query.scw
PDB file : Tito_Scwrl_4BFA.pdb: