Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence------MMKKEIVLTAAMMLFSMVASTTFVSATEVYPKEYN-TEGTITFEAGDEGVTPPVDPENPDPNKPVDPSDPPSPGTGGALSIDYGSKFKFGTQKISTADKTYYAAADVMNDGSRKPTYVQVTDRRS--TLSGWKLSVSQPEQFKTASGDELVGAQLKFTKGQAVSLVDPTYTPQTVNSELTLTPGGNNTLAINAKSGTGVGTWVYRFGANENENQDAVQLSVPGKSVKLAQQYSTKLVWTLEDTPNN---
5FHY Chain:A ((21-249))DILKASATQSAVAGTYQIQVNSLATSSKIALQAIADPANAKFNSGTLNISVGDTKL----------PAITVDSSNNTLAGMRDAINQA-GKEAGVSATIITDNSGSRLVLSST-KTGDGKDIKVEVSDDGSGGNTSLSQLAFDPATAPKLSDGA----AAGYVTKAANGEITVDGLKRSIASNSVSDVIDG---VSFDVKAVTEAGKPITLTVSRDDAG-------VKDNVKKFVEAYNTLTKFINEQTVVTKVG


General information:
TITO was launched using:
RESULT:

Template: 5FHY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1028 78984 76.83 363.98
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : 76.83
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.149

(partial model without unconserved sides chains):
PDB file : Tito_5FHY.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5FHY-query.scw
PDB file : Tito_Scwrl_5FHY.pdb: