Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNRTLKELILAAEFAAIISVLSQMTIPFGLVPLTGQTFAIGLTATFLGRKLGLISVGVYLLLGLIGLPVFSGMTGGIAVLFGPT-GGYL----IGFLLQTWITGWMIERTDAHYLYAIFAN-LMGSLAALICGTIWLKISGDLTFTTAFASGLLPFLLPEAIKATGAAYIGILMKKRLNRFLHTN
5JSZ Chain:G ((9-173))SKLELRELVLLAMVIAIKVILGQFKVGNATLQVGLGFIGSVMLGYLFGPWWGFAGGALSDLV---------------SSVIFGNLGGFFIGFTLTAALGPMIYGFFLYKQPIQIWRVIASVICVTVICNIGLNTLWVSMMYGINFMVALSSRILKEMITPWIQMVAVWFILEGLSRVKLS-----


General information:
TITO was launched using:
RESULT:

Template: 5JSZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain G - contact count / total energy / energy per contact / energy per residue : 660 -111137 -168.39 -698.97
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain G : 0.67

3D Compatibility (PKB) : -168.39
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.221

(partial model without unconserved sides chains):
PDB file : Tito_5JSZ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5JSZ-query.scw
PDB file : Tito_Scwrl_5JSZ.pdb: