Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKTRRKPMKFMTLNTHSWLEP-----EPEKKLQELADKILLEDYEVIALQEINQLLES-EEVEPAKLMKFCPVKNQVPIRKDNFAYRLVQLLKEHGKEYFWSWEMSH-----------IGYDKYEEGNALLTKKTLES-QVLTVSQFQKKEDYQTRKILIGKTKIDDQDIFVSSCHFSWWTDK------KSGFYFEWKNLENYFLE----TRVPLFFLGDFNNPVDSQGYYTVRESCLLLQDSYVVANEKGKAATVEKKI---DGWE-QNTEKLRIDFIFVPEGMQ-VKKYQRI------------F-DGIDSPIISDHYGVEIELDVNE
3WCX Chain:A ((7-298))----TPSLKVLTYNTFLMSTGLYPNWGQEHRAREIAAAGFFQGNDVVVLQEAFDNAAADGLK---------------------------AAAAD-RYPYQTPVVGRSRDGWDATGGKYSATTPEDGGVTVLSKWPIVRKEQVIFNDACGADWWSNKGFAYVVLNVGGTRVHVVGTHAQSTDSGCAAGEAAADRSRQFRQIDAFLDAKNIPADEQVMLAGDLNVDSHSAEYASMLAD-GDLAPADSRAGH---PYSFDTKENSIAAYRYPTDPREDLDYVLHRNGHARPAGWRNTVVQETSAPWTVSSWKRYTYTDLSGHYPVIAGAN---


General information:
TITO was launched using:
RESULT:

Template: 3WCX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1375 59162 43.03 241.48
target 2D structure prediction score : 0.51
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : 43.03
2D Compatibility (Sec. Struct. Predict.) : 0.51
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.291

(partial model without unconserved sides chains):
PDB file : Tito_3WCX.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3WCX-query.scw
PDB file : Tito_Scwrl_3WCX.pdb: