Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIKGTFKRNDAGQIVSFTLTGHADAGPYGSDIVCAGVSALAISTVNGIASLAGFEPIVEMNE---EEGGYLYTEVTSGMTQEQNNIAEILLENLLLGLQSIEAENSEYIQIKTINDK
2G0J Chain:C ((1-110))MIQATFIRR-KGILESVELTGHAGSGEYGFDIVCAAVSTLSMNLVNALEVLADC-T-VSLQMDEFDG-GYMKIDLSY-ITNKSDEKVQLLFEAFLLGITNLAENSPEFVTAKIMT--


General information:
TITO was launched using:
RESULT:

Template: 2G0J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 464 -40629 -87.56 -379.71
target 2D structure prediction score : 0.77
Monomeric hydrophicity matching model chain C : 0.81

3D Compatibility (PKB) : -87.56
2D Compatibility (Sec. Struct. Predict.) : 0.77
1D Compatibility (Hydrophobicity) : 0.81
QMean score : 0.459

(partial model without unconserved sides chains):
PDB file : Tito_2G0J.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2G0J-query.scw
PDB file : Tito_Scwrl_2G0J.pdb: