Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKIIVTTCLLATGFLLTACGESQSSNESQQTTIQFMHSSVEQERLSVINELVADFEKENPDIKIKQVPVEESAFNTKIVTLARSGK-LPEVMEVSQD-FAKVMDKDELIDQTAVQNVIE-EAGEDNYYDGAKNLVRSEDGKSYIAAPISGWVQGIWYDKEKLSEAGFSEPENWDDILKIAQHFTDKENKQYGIAMPTAEGTMSEQAFSQFALSNGANVLDDEGEVTIDTEKMREALSFYQNLSQYTM-PGS--NDVTEIKDAFMNGTAPMAIYSTYILPSVYEAG---NSENIGFA-IPTQKDQA--VYGTVSGLTISSGLDEKQKEAAEAFTAFLSQPKNMEKWVLMSPGGAQPVNKQVVELDGYKE-NEVIKSFGELPSEIASAFDEVQVFGLVGEKNFTKMGDITSSGVIGKAVNQVTVGNEDVDQALADAQKNTK
5IAI Chain:A ((24-419))----------------------KP----LDGVTLTLASQND--PFGAVLTKLAAEFKQD-TGADLKVEVMDYGTLLTKTTADFVGKTKGYDLVTMDIVWAGAYQANGYSVDLTDWVKRDAAELDLDDIYPVILQSLGQYKGHYV-AFPFAAYANVLAYRKDLFQAAGLPVPTTVEELVSDAKKLTDPSKKQYGFVANGQKGPAVAQDWMQYNNQMGGSILDNDGKPALNSPENVKSLTVYKQLFVETAPPGAIEYDWGGREESFRQGAAAMMQTWSVGAPGYSDPASSNVVGKVGITTAPVGKGVPPQYGVGGWGMAINADIDPKQKEAAWTFIKWLVSKKIHKEFNMD--GAGSFMRKSQMTDPDLTAKFDFLPVVAK-------TYENGNGEYRPRIPEYPEI-----QDILGSAVNSVLAGAAEPQAALDEAQVEAK


General information:
TITO was launched using:
RESULT:

Template: 5IAI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2207 100051 45.33 261.23
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain A : 0.69

3D Compatibility (PKB) : 45.33
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.436

(partial model without unconserved sides chains):
PDB file : Tito_5IAI.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5IAI-query.scw
PDB file : Tito_Scwrl_5IAI.pdb: