Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTRSSHRKKSKHVALLSVLGVLLVLISFYTYRSTYYTKHFLPNTEINGINVSNLTVEKANEKLKEAYSDKKLAIKEDGKVWQEVPKSELGYKDDFTSELSPILNEQNGWTWGMTYVSAAEKQEIDPVSQNHQKLDTTVQTLTTKLTDLNKDRTPTTDATIEKAGDSFVIKPEVNGNTIDVDAAVKQLKSAVNSGKDTIELTEFKEKPKVTSEDSSLKEQLASMNAIANVKATYSINGETFQIPSSDIMSWLTYNDGKVDLDTEQVRQYVTDLGTKYNTSTNDTKFKSTKRGEVTVPVGTYSWTIQTDSETEALKKAILAGQDFTRSPIVQGGTTADHPLIEDTYIEVDLENQHMWYYKDGKVA----------LETDIVSGKPTTPTPAGVFYVWNKEEDATLKGTNDDGTPYESPVNYWMPIDWTGVGIHDSDWQP-EYGGDLWKTRGSHGCINTPPSVMKELFGMVEKGTPVLVF
4K73 Chain:A ((129-273))-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AVVGVASISQHTFTVSIDGVEEGPPRVHFGEDGVMPASMGRPEYPTPVGSYTVLSKERSVIMDSS-----GYRLSVDYAVRITSRGLYVHSAPWALPALGL----ENVSHGCISLSREDAEWYYNAVDIGDPVIVQ


General information:
TITO was launched using:
RESULT:

Template: 4K73.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 556 -1314 -2.36 -11.33
target 2D structure prediction score : 0.74
Monomeric hydrophicity matching model chain A : 0.58

3D Compatibility (PKB) : -2.36
2D Compatibility (Sec. Struct. Predict.) : 0.74
1D Compatibility (Hydrophobicity) : 0.58
QMean score : 0.637

(partial model without unconserved sides chains):
PDB file : Tito_4K73.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4K73-query.scw
PDB file : Tito_Scwrl_4K73.pdb: