Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSRPCLLLLGIDVVFAHISGSCINHVGRADLVMLRRGFCRSIPLLGPTFTELVERLDSFEKEFIEWKAFRKAVESTSPKVTEAAKEIIAESMKEVKTSKVNLENPLTPEEFTELNQFYAKQKVKDIFFENLLYINTP-NDLMQHSETVFRQYLVRIARRVRHLNHAPYGLSQMPGIQMLKKWYQWSFHDVRSTPVP--TTRDECYRCDRMVRRVFLRHYNVSSLITDGMVEFASREGWTHVDEEVMRTYDELQNFFEAFCLGRVRLRFL-VGNYMYLSTKILGVSKEEYAVNDPDGLTVPIFFDHNAEDFVGQICKKCSLLVLTKCAIKEAQASYD------AEIELK---LAG-DPNLVFVGIPYITYDIICAMLEDAVSANVDRQERTGKACTKIEVTLAQWPTNKRFVLRISDTAGGMTLRQASKQLSCWSLYRNIQGHNQDTISTWTSSPIRLPYAYNAARVIGGNITLASIEGYGTDRQLYLPSTGLAGVSL
3D2R Chain:B ((4-360))---------------------------------------------------------------------------------------------------------------PREVEHFSRYSPSPLSMKQLLDFGSENACERTSFAFLRQELPVRLANILKEIDILPTQLVNTSSVQLVKSWYIQSLMDLVEFHEKSPDDQKALSDFVDTLIKVRNRHHNVVPTMAQGIIEYK-ACTV---D---PVTNQNLQYFLDRFYMNRISTRMLMNQHILIFSDSQTG-----------------------NPSHIGSIDPNCDVVAVVQDAFECSRMLCDQYYLSSPELKLTQVNGKFPDQPIHIVYVPSHLHHMLFELFKNAMRATVEHQEN-QPSLTPIEVIVV--LGKEDLTIKISDRGGGVPLRIIDRLFSYTYSTAPTP--------PLAGFGYGLPISRLYAKYFQGDLNLYSLSGYGTDAIIYLKALSSE----


General information:
TITO was launched using:
RESULT:

Template: 3D2R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1487 -45675 -30.72 -139.68
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain B : 0.65

3D Compatibility (PKB) : -30.72
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.446

(partial model without unconserved sides chains):
PDB file : Tito_3D2R.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3D2R-query.scw
PDB file : Tito_Scwrl_3D2R.pdb: