Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-MNRRNDMSVYGR----VEEVHKENREPLEYQIEQESHHRESSRLPLVKILLWSTLVTGITLGVPLLLDLMSAQEVQDFY----AGWALHQTGKIYSDYYGSQGLLYYLLTYVSQGGFFFAIF---EWLALVAGGFFLFRSADTLTEQGDQAGHLVTIFYMLVTGLAFGGGYATL------LALPFLFAAFSLVAAYLSNPSHDKGFVRIGLALAGGFFFAPLSSLLFIAVVSLGLLVFNLGHRRFVHG-----FYQFLAVALGFSLVFYPTAYYSAATGSFGDAISGIRYPIDSIRFDFTSKILENMFFYG------------LLSLGLGFVVCIFLGLFQSKPFKLYVISVPASLVVILGLILLFFSQEPLHASYLMVV-FPVFLLLLVTN---IKSQQRGRSARRSRRETPVSLW-------------SRFFKGNLYL---LVFGFVYLLSVPFLMKFVLY---PVPYQERNRLADLVKEETNTEDAIYAWDDTATLYRKSERLSPSAILSPLHYTA-TEENRNKLLNDLKEKQ-----PKVIVVNDKVVVWSEVETLLKENYQQVKTDYSEFKVYKIK
3SAM Chain:A ((25-572))AMNNTIINSLISIKRSNVFAVDSQIPTLYMPQYISLSGVMTNDNQAIASFEIRDQYITALN-HLVLSLELPEVKGMGRFGYVPYVGYKCINHVSISSCNG---------VIWEIEGEELYNNCINNTIALKHSGYSSELNDISIGLTPNDTIKEPSTVYVYIKTPFDVEDTFSSLKLSDSKITVTVTFNPVSDIVIR------DSSFDFETFNKE--FVYVPELSFIGYMVKNVQIKPSFIEKPRRVIGQINQPTATVTEVHAATSLSVYTKPYYGNTDNKFI-SYPGYSQDEKDYIDAYVSRLLDDLVIVSDGPPTGYPESAEIVEVPEDGIVSI-----QDADVYVKIDNVPDNMSVYLHTNLLMFGTRKNSFIYNISKKFSAITGTYSDATKRTIFAHISHSINIIDTSIPVSLWTSQRNVYNGDNRSAESKAKDLFINDPFIKGIDFKNKTDIISRLEVRFGNDVLYSENGPISRIYNELLT--------KSNNGTRTLTFNFTPKIFFRPTTITANVSRGKDKLSVRVVYSTMGVNHPIYYVQKQLVVVCNDLYKVSYDQ---------GVSITKIM


General information:
TITO was launched using:
RESULT:

Template: 3SAM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2271 -90749 -39.96 -190.25
target 2D structure prediction score : 0.31
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : -39.96
2D Compatibility (Sec. Struct. Predict.) : 0.31
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.184

(partial model without unconserved sides chains):
PDB file : Tito_3SAM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3SAM-query.scw
PDB file : Tito_Scwrl_3SAM.pdb: