Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MISKRLELVASFVSQGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLA-AFEETDQVSVITIAGMGGRL----IARILEEGLGKLANVERLILQPNN----------------REDDLRIWLQDHGFQIVAERILEEAGKFYEILVVEAGQMKLSASDVRFGPFLSKEVSPVFVQKWQKEAEKLEFALGQIPEKNLEERQVLVDKIQAIKEVLHVSK 5UBB Chain:A ((60-202)) --------------GTDCALDCGSGIGRVSKHVLLPVF-NSVELVDMMESFLLEAQNYLQVKGD---ESYHCYSLQEFTPPFRR-YDVIWIQWVSGHLTDKDLLAFLSRCRDGLKENGIIILKDNVAREGCILDLSDSSVTRDMDILRSLIRKSGLVVLG--------------------------------------------------------------------------------------

General information: TITO was launched using: RESULT: Template: 5UBB.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 530 -22580 -42.60 -188.17 target 2D structure prediction score : 0.49 Monomeric hydrophicity matching model chain A : 0.60 3D Compatibility (PKB) : -42.60 2D Compatibility (Sec. Struct. Predict.) : 0.49 1D Compatibility (Hydrophobicity) : 0.60 QMean score : 0.345

(partial model without unconserved sides chains): PDB file : Tito_5UBB.pdb: (Unconserved sides chains are recalculated) : Sequence: align-5UBB-query.scw PDB file : Tito_Scwrl_5UBB.pdb: