Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMINCGAKMLIQRGGLKVVAGLGISGV-SAVNFLHEQGYQVAVTDSRPTPPGHDQIPA-GVKTSFGQLDQELLLQAEEIILSPGLAPQLPEIQAAIAKGISVVGDIQLLRRAT-DVPIVAITGSNAKSTVTTLIGLMAKDAGKKV-AVGGNLGRPALD-LLKDQPELLVLELSSFQLETTSHLNAEVAVVLNMSEDHLDRHG-NMLGYHQAKHRIFQGA---KKVVFNRDDALSRPLVPD-TTPMQSFGLNAPDLNQYGVLR-DA--DGTLWLARGLQRLIKSSDLYIQGMHNVANALACLALGEAIGLPMESMLETLKQFKGLEHRCEYVKT--------VHD-VRYYNDSKGTNVGATLAAIDGLGAAIEVKKGKVALILGGQG--KGQD-FSPLRSSIEKYAKVVVLI-----------GEDAPVIEQAIQGA--TKILHAATLKEAVELCQRETQAEDVVLLSPACASFDMFKSYNDRGQQFVACVNSLV
2F00 Chain:B ((10-469))---RSIVPEMRRVRHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAPNPV-TQQLMNLGATIYFN-HRPENVRDASVVVVSSAISADNPEIVAAHEARIPVIRRAEMLAELMRFRHGIAIAGTHGKTTTTAMVSSIYAEAGLDPTFVNGGLVKAAGVHARLGHGRYLIAEADESDAS-FLHLQPMVAIVTNIEADHMDTYQGDFENLKQTFINFLHNLPFYGRAVMCVDDPVIRELLPRVGRQTTTYGFSED--ADVRVEDYQQIGPQGHFTLLRQDKEPMRVTLNAPGRHNALNAAAAVAVATEEGIDDEAILRALESFQGTGRRFDFLGEFPLEPVNGKSGTAMLVDDY-GHHPTEVDATIKAARAGW--PDKNLVMLFQPHRFTRTRDLYDDFANVLT-QVDTLLMLEVYPAGEAPIPGADSRSLCRTIRGRGKIDPILVPDPARVAEMLAPVLTGNDLILVQGAGNIG---------------------


General information:
TITO was launched using:
RESULT:

Template: 2F00.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 2417 3641 1.51 8.63
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain B : 0.69

3D Compatibility (PKB) : 1.51
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.493

(partial model without unconserved sides chains):
PDB file : Tito_2F00.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2F00-query.scw
PDB file : Tito_Scwrl_2F00.pdb: