Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLVEKLRRKIMQSKTLFLLGLCTIFSTTVSALPLDSKGAKQRLSQAAKQKVFQGKIDLDALVSNDSNDLIVEYNIPSSSVSSGLERRSYIATNKKNLQTRFSRAGGVQVLRDYNNLPLAFYRISNREALIALLNDPNVKAVYPNRINRTTTTESLPLINQPQANTNGFTGEGSSVAVLDTGVNYLHSDFGCTAVNTPSSTCRVVYSFDSAPDDGTLDDDGHGSNVSAIVSKVATK-TKIIGIDVFRKVRSQGKWVSTAYDSDILAGINWAVNNAQTYNIKAVNLSLGVPGVKYTSECSDSSYGTAFANARAAGVVPVVASGNDAFPDGISSPACVAGAVRVGAVYDSNIGGVSWGNPVKCSDPTTAADKVACFSNGGSLVTLLAPGAMITAGGY-------TMGGTSQATPHVAGAIAL-LRANSVSPTESIDQTISRLKATGKPITDSRTGLVFPRIDLLAATNGLTVN
4DZT Chain:A ((18-259))----------------------------------------------------------------------------------------------------------------------------------------------------------LPLSN---SYTYTATGRGVNVYVIDTGIRTTHREFGG----------RARVGYDALGGNGQ-DCNGHGTHVAGTIGGVTYGVAKAVNLYAVRVLDCNG----SGSTSGVIAGVDWVTRNHRRPAVANMSLGGGV----------STALDNAVKNSIAAGVVYAVAAGNDNANACNYSPARVAEALTVGA--------------------TTSSDARASFSNYGSCVDLFAPGASIPSAWYTSDTATQTLNGTSMATPHVAGVAALYLEQNPSATPASVASAILNGATTGR--------------------------


General information:
TITO was launched using:
RESULT:

Template: 4DZT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1572 -39960 -25.42 -171.50
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : -25.42
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.391

(partial model without unconserved sides chains):
PDB file : Tito_4DZT.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4DZT-query.scw
PDB file : Tito_Scwrl_4DZT.pdb: