Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMHSQPLLDCWNLDQILDDLNAHGFAIVNQAYSAEYHTQVAKECSHH--FDEFREAGIQNGVVSTIRSDHILWINESLPVA-EQHVETLTSFCQHLNQAFFLGIKEVEAHFACYNPGEFYALHRDNPQQKNDRIMSTVYYLHPQWQDDWGGQLRLQDKNDIWHIITPEPNRLVIFQSN-LLHEVLVSKQQRLSITAWLRSGNSIWV
4J25 Chain:C ((32-222))-----------LAAVVDDLATHGWSQQAHFLPADLVRALAAECRRRDAEGEL-------------------WIDPGQAEACDQYLAAMDQLRLAINQGLFLGLEDFECHFALYPPGAFYRRHLDRFRDDDRRMVSAVLYLNEGWQPHDGGQLRMFLADGVEHDVEPVAGCLVVFLSGEVPHEVLPAGRERLSLTGWFR-------


General information:
TITO was launched using:
RESULT:

Template: 4J25.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 754 -34921 -46.31 -212.93
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain C : 0.74

3D Compatibility (PKB) : -46.31
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.389

(partial model without unconserved sides chains):
PDB file : Tito_4J25.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4J25-query.scw
PDB file : Tito_Scwrl_4J25.pdb: