Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMSLLRLDRLHYCILMSMGCISSPLVWAEDLNSDVAKLPTLHVEATRTDTGYLQTPASVFRIEAPQVDSSSQVNLTEVVKGIPSLQIRNRENYAQDLQLSMRGFGARSTFGVRGIRLYVDGIPATMPDGQGQTSNIDLSSLDHVEVLTGPFSSLYG-NSSGGTILTSTKEGQGKDSIELSYSGGSHDKSRAGLVLQGGAKGANEPSYIISSSYFDTDGYREHSGAEKVLNNAKLSWNLDDGSKINWVTNYVKINA-DDPGGLTRAD----WQNNPKQVVQNVL-DYNARKEIEQTQTGLTWSKPINDQHELYAMTYMGQRQVTQYQS--IPD----T-VQKNPN---TP----YQ---AGGVIDFKRNYYGADFRWTGKEL-LPN-TTLSIGVALDAMKEDRQGYQNF-NDTG-----------------------DKG--VKG-ALRRDEDNTLWNIDPYVQASWQFLPTWRLDTGVRYSNVHYKSKDYYIVGLNGDNSGKTSYEEVLPSVALSWQITPEVLAYASYAKGFETPTFTEMAYPAQGGASTLDLKPSTSDTYETGLKSQ-NQ-LGDFTLAVFQTKTKNDIVSAESFGGRSTFRNADKTLREGVEFAWNKKLWRDLIAIASYTYLDATFDSTVPAAGKISEIPEGNAIPGIAKNQAYVSLAWQPSH----GLYGGVDVQYMDKVYVNDTNSDAAPSYSVTSANVGYAWVM-GDWKVNSFARVDNLFDRNYAGSVIVNDSTQPVGRYFEPADGRNWSAGLRVIKQF
1FI1 Chain:A ((7-707))--------------------------------AATIAARQSATGTKTDTPIQKVPQSISVVTAEEMALHQPKSVKEALSYTPGVSVGTRGASNTYDHLIIRGFAAEG----QSQNNYLNGLKLQGNF--YNDAVIDPYMLERAEIMRGPVSVLYGKSSPGGLLNMVSKRPTTEPLKEVQFKAGTDSLFQTGFDFSDSLDDDGVYSYRLTGLARSANAQQKGSEEQRYAIAPAFTWRPDDKTNFTFLSYFQNEPETGYYGWLPKEGTVEPLPNGKRLPTDFNEGAKNNTYSRNEKMVGYSFDHEFNDTFTVRQNLRFAENKTSQNSVYGYGVCSDPANAYSKQCAALAPADKGHYLARKYVVDDEKLQNFSVDTQLQSKFATGDIDHTLLTGVDFMRMRNDINAWFGYDDSVPLLNLYNPSSHHHHHHGSSVNTDFDFNAKDPANSGPYRILNKQKQTGVYVQDQAQW-DKVLVTLGGRYDWADQESLNRVA-----GTTDKRDDKQFTWRGGVNYLFDNGVTPYFSYSESFEPSSQVGK-------DGNI-FAPSKGKQYEVGVKYVPEDRPIVVTGAVYNLTKTNNLMADPE--GSFFSVEGGEIRARGVEIEAKAALSASVNVVGSYTYTDAEYTTDT--------TYKGNTPAQVPKHMASLWADYTFFDGPLSGLTLGTGGRYTGSSYGDPANSFKVGSYTVVDALVRYDLARVGMAGSNVALHVNNLFDREYVASCFN-------TYGCFWGAERQVVATATFRF--


General information:
TITO was launched using:
RESULT:

Template: 1FI1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 3957 140112 35.41 218.58
target 2D structure prediction score : 0.43
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : 35.41
2D Compatibility (Sec. Struct. Predict.) : 0.43
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.125

(partial model without unconserved sides chains):
PDB file : Tito_1FI1.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1FI1-query.scw
PDB file : Tito_Scwrl_1FI1.pdb: